Package: eHDPrep
Type: Package
Title: Quality Control and Semantic Enrichment of Datasets
Version: 2.0.1
Authors@R: c(person("Tom", "Toner", role = c("aut"),
                    email = "ttoner03@qub.ac.uk",
                    comment = c(ORCID = "0000-0001-8059-5822")),
             person("Kluivert", "Boakye Duah", role = c("aut"),
                    email = "kboakyeduah01@qub.ac.uk",
                    comment = c(ORCID = "0009-0000-4314-9831")),
             person("Ian", "Overton", role = c("aut", "cre"),
                    email = "I.Overton@qub.ac.uk",
                    comment = c(ORCID = "0000-0003-1158-8527"))
              )
Maintainer: Ian Overton <I.Overton@qub.ac.uk>
Description: A tool for the preparation and enrichment of health
        datasets for analysis (Toner et al. (2023)
        <doi:10.1093/gigascience/giad030>). Provides functionality for
        assessing data quality and for improving the reliability and
        machine interpretability of a dataset. 'eHDPrep' also enables
        semantic enrichment of a dataset where metavariables are
        discovered from the relationships between input variables
        determined from user-provided ontologies.
License: GPL-3
URL: https://github.com/overton-group/eHDPrep
BugReports: https://github.com/overton-group/eHDPrep/issues
Encoding: UTF-8
LazyData: true
Config/build/compact-vignettes: both
Imports: ggplot2 (>= 3.3.3), dplyr (>= 1.1.0), forcats (>= 0.5.0),
        stringr (>= 1.4.0), purrr (>= 0.3.4), tidyr (>= 1.1.2),
        kableExtra (>= 1.3.1), magrittr (>= 2.0.1), tibble (>= 3.0.5),
        scales (>= 1.1.1), rlang (>= 0.4.10), quanteda (>= 2.1.2), tm
        (>= 0.7-8), pheatmap (>= 1.0.12), igraph (>= 1.2.6), tidygraph
        (>= 1.2.0), readr (>= 1.4.0), readxl (>= 1.3.1), knitr (>=
        1.31), tidyselect (>= 1.1.0)
BuildVignettes: true
VignetteBuilder: knitr
Depends: R (>= 3.6.0)
Suggests: testthat (>= 2.1.0), ggraph (>= 2.0.5), rmarkdown (>= 2.3),
        VIM (>= 6.0.0)
Config/testthat/edition: 3
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: cmake libfontconfig1-dev libfreetype6-dev
        libfribidi-dev libglpk-dev make libharfbuzz-dev libicu-dev
        libpng-dev libuv1-dev libxml2-dev libx11-dev
Repository: https://overton-group.r-universe.dev
Date/Publication: 2026-09-22 21:27:38 UTC
RemoteUrl: https://github.com/overton-group/ehdprep
RemoteRef: HEAD
RemoteSha: 627e07245934f7bb3641512b24dd44c4c0310910
NeedsCompilation: no
Packaged: 2026-09-22 23:11:55 UTC; root
Author: Tom Toner [aut] (ORCID: <https://orcid.org/0000-0001-8059-5822>),
  Kluivert Boakye Duah [aut] (ORCID:
    <https://orcid.org/0009-0000-4314-9831>),
  Ian Overton [aut, cre] (ORCID: <https://orcid.org/0000-0003-1158-8527>)